SDB
4 January 2016 to 24 June 2016
In the past decades, quantitative biology has been driven by new modelling-based stochastic dynamical systems and partial differential equations. Examples from gene regulation, molecular signalling, cell division and molecular transport, as recently revealed by live cell images, have shown that many processes in cells and in molecular biology are inherently driven by stochastic events. One of the biggest challenges we propose to address in this programme is to develop methods and analysis, as well as efficient algorithms for simulations, to bridge the range of different biological scales. In support of this goal, the programme will focus on
In particular, three interlinked focus areas will run throughout the programme:
The programme will feature an opening, midterm and closing workshop at the Isaac Newton Institute, as well as a Satellite Meeting.
Fellowships are available to partially cover travel costs for some junior US participants thanks to a grant from the NSF. Graduate students and postdocs should send:
1. A current CV.
2. A short letter of recommendation from a professor at your home institution. This letter must attest to the relevance of the workshop/programme to the applicant’s career and research interests, and briefly summarise any previous research by the applicant.
3. Information on which workshop you are applying to attend and what type of support you are requesting. If you are an invited speaker or invited programme participant please note this in your email.
Please send all information by email to sdb_nsf_funding@math.bu.edu.
Priority for funding will be given to applicants, particularly those from underrepresented groups, who are actively working in areas directly related to the programme and workshop themes.
Review of applications will begin on 11 October 2015.
The Institute kindly requests that any papers published as a result of this programme’s activities are credited as such. Please acknowledge the support of the Institute in your paper using the following text:
The author(s) would like to thank the Isaac Newton Institute for Mathematical Sciences, Cambridge, for support and hospitality during the programme Stochastic dynamical systems in biology: numerical methods and applications, where work on this paper was undertaken. This work was supported by EPSRC grant EP/K032208/1.
Click here to download the programme's final scientific report
Title | Year | Programme | Publication Date |
---|---|---|---|
Multilevel Monte Carlo for scalable Bayesian computationsAuthors: T Nagapetyan, Lukasz Szpruch, Sebastian Vollmer, Konstantinos Zygalakis |
2015 | SDB | 21 October 2016 |
Constrained approximation of effective generators for multiscale stochastic reaction networks and application to conditioned path samplingAuthors: Simon Cotter |
2015 | SDB | 21 October 2016 |
18 January 2016 to 22 January 2016
29 February 2016 to 4 March 2016
4 April 2016 to 8 April 2016
20 June 2016 to 24 June 2016
The Organisers would like to thank the following sponsors for their generous support of the event:
Tuesday 12th January 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Ulrich Dobramysl University of Cambridge; University of Oxford |
Room 2 |
Wednesday 13th January 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Karen Lipkow |
Room 2 |
Tuesday 26th January 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Grant Lythe University of Leeds |
Room 2 |
Wednesday 27th January 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Steve Andrews |
Room 2 |
Friday 29th January 2016 | |||
---|---|---|---|
14:30 to 17:00 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 2 |
Tuesday 2nd February 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Pietro Cicuta University of Cambridge |
Room 2 |
Wednesday 3rd February 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Konstantinos Zygalakis |
Room 1 |
Friday 5th February 2016 | |||
---|---|---|---|
14:30 to 17:00 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 1 |
Tuesday 9th February 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Yongzheng Sun |
Room 1 |
Wednesday 10th February 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Bence Mélykúti Albert-Ludwigs-Universität Freiburg |
Room 2 |
Friday 12th February 2016 | |||
---|---|---|---|
14:30 to 17:00 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 1 |
Tuesday 16th February 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Framework for Construction of Caricature Chemical Reaction Systems |
Room 2 |
Wednesday 17th February 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Omer Dushek |
Room 2 |
Tuesday 23rd February 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Grant Lythe University of Leeds |
Room 2 |
Wednesday 24th February 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Krasimira Tsaneva University of Exeter |
Room 2 |
Friday 26th February 2016 | |||
---|---|---|---|
14:30 to 17:00 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 2 |
Friday 4th March 2016 | |||
---|---|---|---|
14:30 to 17:00 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 2 |
Tuesday 8th March 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Mark Flegg Monash University |
Room 2 |
Wednesday 9th March 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Andreas Hellander Uppsala Universitet |
Room 2 |
Friday 11th March 2016 | |||
---|---|---|---|
14:30 to 17:00 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 2 |
Tuesday 15th March 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Shuohao Liao University of Oxford |
Room 2 |
Wednesday 16th March 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Romain Yvinec Université François-Rabelais Tours; INRA - Institut National de la Recherche Agronomique |
Room 2 |
Friday 18th March 2016 | |||
---|---|---|---|
14:30 to 17:00 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 2 |
Monday 21st March 2016 | |||
---|---|---|---|
14:00 to 15:00 |
Stefan Hellander |
Room 2 |
Tuesday 22nd March 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Julius Kirkegaard University of Cambridge |
Room 2 |
Tuesday 29th March 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Peter Roland Kramer Rensselaer Polytechnic Institute |
Room 2 |
Wednesday 30th March 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Sandro Azaele |
Room 2 |
Tuesday 12th April 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Yiannis Kaznessis |
Room 2 |
Wednesday 13th April 2016 | |||
---|---|---|---|
15:00 to 16:00 |
James Rothman Yale University |
Room 1 |
Friday 15th April 2016 | |||
---|---|---|---|
14:30 to 17:00 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 2 |
Tuesday 19th April 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Bob Eisenberg Rush University |
Room 2 |
Friday 22nd April 2016 | |||
---|---|---|---|
14:30 to 17:00 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 2 |
Tuesday 26th April 2016 | |||
---|---|---|---|
15:00 to 16:00 |
André Leier |
Room 2 |
Thursday 28th April 2016 | |||
---|---|---|---|
11:00 to 12:00 |
Colin Gillespie |
Room 2 |
Friday 29th April 2016 | |||
---|---|---|---|
14:30 to 17:00 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 2 |
Wednesday 4th May 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Chuan Xue Ohio State University |
Room 2 |
Thursday 5th May 2016 | |||
---|---|---|---|
16:00 to 17:00 |
Tatiana T Marquez Lago |
Room 2 |
Friday 6th May 2016 | |||
---|---|---|---|
14:30 to 17:00 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 2 |
Tuesday 10th May 2016 | |||
---|---|---|---|
15:00 to 16:00 |
German A. Enciso |
Room 2 |
Wednesday 11th May 2016 | |||
---|---|---|---|
10:00 to 13:00 |
Steve Andrews Fred Hutchinson Cancer Research Centre |
Discussion Room | |
15:00 to 16:00 |
Ralf Metzler Universität Potsdam |
Room 2 |
Friday 13th May 2016 | |||
---|---|---|---|
11:00 to 12:00 |
John Fricks Pennsylvania State University |
Room 2 | |
14:30 to 15:30 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 2 |
Tuesday 17th May 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Jürgen Reingruber CNRS - Ecole Normale Superieure Paris |
Room 2 |
Wednesday 18th May 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Kevin Burrage Queensland University of Technology |
Room 2 |
Thursday 19th May 2016 | |||
---|---|---|---|
16:00 to 17:00 |
Dan Coombs |
Room 2 |
Friday 20th May 2016 | |||
---|---|---|---|
14:30 to 17:00 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 2 |
Friday 27th May 2016 | |||
---|---|---|---|
14:30 to 17:00 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 1 |
Tuesday 31st May 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Stephen Smith University of Edinburgh |
Room 2 |
Wednesday 1st June 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Garyk Papoian |
Room 2 |
Monday 6th June 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Vahid Shahrezaei |
Room 2 |
Tuesday 7th June 2016 | |||
---|---|---|---|
15:00 to 16:00 |
André Leier |
Room 2 |
Wednesday 8th June 2016 | |||
---|---|---|---|
15:00 to 16:00 |
David Schnoerr University of Edinburgh |
Room 2 |
Thursday 9th June 2016 | |||
---|---|---|---|
16:00 to 17:00 |
Tuomas Knowles University of Cambridge |
Room 2 |
Friday 10th June 2016 | |||
---|---|---|---|
11:00 to 12:00 |
Jonathan Mattingly |
Room 2 |
Monday 13th June 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Justine Dattani Imperial College London |
Room 2 |
Tuesday 14th June 2016 | |||
---|---|---|---|
11:00 to 12:00 |
Ben o'shaughnessy Columbia University |
Room 2 | |
15:00 to 16:00 |
Markos A. Katsoulakis |
Room 2 |
Wednesday 15th June 2016 | |||
---|---|---|---|
15:00 to 16:00 |
Kevin Lin |
Room 2 |
Thursday 16th June 2016 | |||
---|---|---|---|
11:00 to 12:00 |
Bence Mélykúti Albert-Ludwigs-Universität Freiburg |
Room 2 |
Friday 17th June 2016 | |||
---|---|---|---|
14:15 to 17:00 |
David Holcman CNRS - Ecole Normale Superieure Paris |
Room 2 |
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